However, implementation of high-quality NGS and bioinformatics in research and public health laboratories can be challenging.įor instance, NGS and bioinformatics approaches have been used to identify outbreak origins, track transmissions, investigate epidemic dynamics, determine etiological agents of a disease, and discover novel human pathogens. These challenges mainly include the choice of the sequencing platform and the sequencing approach, the choice of bioinformatics methodologies, access to the appropriate computation and information technology infrastructure, and recruiting and retaining personnel with the specialized skills and experience in this field. In this review, we summarize the most common NGS and bioinformatics workflows in the context of infectious disease genomic surveillance and pathogen discovery, and highlight the main challenges and considerations for setting up an NGS and bioinformatics-focused infectious disease research public health laboratory. We describe the most commonly used sequencing platforms and review their strengths and weaknesses. CLC Sequence Viewer has not been rated by our users yet. CLC Sequence Viewer runs on the following operating systems: Windows. It was initially added to our database on. The latest version of CLC Sequence Viewer is currently unknown.
#Highlight sequence clc sequence viewer software
We review sequencing approaches that have been used for various pathogens and study questions, as well as the most common difficulties associated with these approaches that should be considered when implementing in a public health or research setting. CLC Sequence Viewer is a Shareware software in the category Miscellaneous developed by CLC bio AS.
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